LEARN IN CONNECTED STEPS

Cell Signaling

Signals pass through branching networks, with outcomes shaped by cell type and context.

FOLLOW ONE EXAMPLE

See how the pieces connect

  1. Step 1EGF signala growth-factor example outside the cell
  2. Step 2EGFRa receptor input that can branch into both networks
  3. Step 3RAS-GTPKRAS is one human RAS isoform and an example node
  4. Step 4RAF-MEK-ERKthe core MAPK kinase relay
  5. Step 5ERK responseERK2 acts on targets; outcomes depend on context
WORKED EXAMPLE

An EGFR signal can feed more than one route. Through adaptor proteins, it can promote RAS-GTP and the RAF-MEK-ERK relay. Receptor-associated signals and RAS can also engage PI3K, leading to PIP3 and regulated AKT signaling. The balance depends on the cell, its state, and feedback; this map is a selected teaching model, not a universal response.

Read the supporting reference: Reactome · Signaling by EGFR (R-HSA-177929)
FOLLOW THE CONNECTIONS

EGFR can feed two connected growth-signaling networks

Compare the RAS-RAF-MEK-ERK relay with the PI3K-AKT-mTORC1 network, then inspect where they share inputs.

MAPK: receptor to RAS

A representative growth-factor input activates the RAS switch

MAPK: kinase relay

The core RAF-MEK-ERK module; RAF dimers and feedback tune activity

PI3K: membrane signal to AKT

A lipid signal brings kinases together at the membrane

AKT to mTORC1 outputs

Growth factors are only one input; mTORC1 also senses nutrients and energy

Where the routes meet

Shared inputs do not make the networks identical or interchangeable

HER2-containing receptor context

HER2 has no established soluble ligand of its own; it can pair with ligand-activated ERBB receptors

Selected human-cell teaching map, not a complete signaling model. EGFR and other receptors can feed different branches; GTP-bound RAS can engage RAF and PI3K. AKT and mTORC1 outputs vary with isoforms, cell state, feedback, and subcellular location. mTORC1 also integrates amino-acid, energy, and oxygen signals, so neither pathway is a deterministic chain to one cell fate.

Reactome · Signaling by EGFR (R-HSA-177929) ↗Reactome · Signaling by ERBB2 (R-HSA-1227986) ↗Reactome · RAF/MAP kinase cascade (R-HSA-5673001) ↗Reactome · PIP3 activates AKT (R-HSA-1257604) ↗Reactome · mTORC1-mediated signaling (R-HSA-166208) ↗Nature · RAS/RAF/MAPK pathway review (2023) ↗PMC · PI3K/AKT/mTOR and RAF/MEK/ERK review (2022) ↗
FOLLOW THE CONNECTIONS

A GPCR signal becomes a cAMP message

Follow one Gs-coupled route, then compare three separate controls that shorten, remove, or redirect the signal.

Activate a Gs-coupled receptor

The receptor catalyzes GDP release and GTP binding on its partner G protein

Make and read the second messenger

ADCY5 is one adenylyl cyclase isoform; cAMP has effectors beyond PKA

Signal termination and receptor control

These mechanisms act at different points and are not interchangeable

This is one representative GPCR branch. Ligand-bound receptors promote nucleotide exchange; Gαs does not exchange GDP for GTP by itself. RGS/GAP activity is Gα-family-specific, phosphodiesterases convert cAMP to AMP, and β-arrestins can both uncouple receptors and scaffold other signals.

Reactome · G alpha (s) signalling events (R-HSA-418555) ↗Reactome · G alpha (s) activates adenylyl cyclase (R-HSA-163617) ↗Reactome · PKA activation (R-HSA-163615) ↗Reactome · cAMP degradation by phosphodiesterases (R-HSA-418553) ↗PNAS · Gαq GTP hydrolysis and GAP activity (1999) ↗Pharmacological Reviews · GPCR kinases and arrestins ↗
FOLLOW THE CONNECTIONS

An insulin signal moves GLUT4

One well-studied route links a hormone at the cell surface to glucose transport in muscle and fat cells.

This is a representative pathway, not a universal insulin response. GLUT4 is prominent in skeletal muscle and adipose tissue; exercise and other signals also affect its trafficking. Insulin signaling branches and differs by tissue and context.

NCBI Endotext · Insulin receptor signal transduction ↗Reactome · Insulin receptor and GLUT4 ↗
CHECK YOUR UNDERSTANDING

Which statement best describes how active RAS connects the two signaling networks?

Choose one answer
KEEP EXPLORING

Topics in this branch

22 linked records
01

Cell Signaling

How cells detect information and convert it into changes in behavior, chemistry, or gene activity.

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02

Ligands And receptors

A ligand is a molecule that binds a specific partner, such as a receptor, and can change its activity.

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03

Insulin

A hormone that helps coordinate nutrient use and storage after food intake.

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04

Insulin Receptor

A cell-surface receptor that detects insulin and initiates intracellular signaling.

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05

Insulin Signaling

How insulin receptor signaling coordinates glucose uptake and nutrient storage.

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06

GLUT4 Glucose uptake

Insulin and muscle contraction can move GLUT4 transporters to the surface of muscle and adipose cells.

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07

GPCR Signaling

How G-protein-coupled receptors convert outside signals into intracellular changes.

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08

Receptor Tyrosine kinase signaling

How growth-factor receptors use phosphorylation to assemble signaling networks.

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09

Second Messengers

Small intracellular signals that relay and distribute information after many receptors are activated.

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10

Signal Amplification

A signaling process in which one activated component influences many downstream molecules.

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11

Protein Kinases

Enzymes that transfer phosphate groups, usually from ATP, onto protein targets.

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12

Protein Phosphatases

Enzymes that remove phosphate groups from proteins and help balance kinase activity.

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13

Protein Phosphorylation

A reversible chemical modification that can change a protein's activity or interactions.

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14

Feedback In signaling

Signals can feed back to strengthen, weaken, or reshape the pathway that produced them.

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15

RAS-RAF-MEK-ERK Signaling (MAPK)

A growth-signal network whose core RAS-RAF-MEK-ERK relay regulates cell responses, with output shaped by feedback, location, and cell context.

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16

PI3K-AKT-mTOR Signaling

A growth- and nutrient-responsive network in which PI3K lipid signals regulate AKT and connect with mTORC1, metabolism, survival, and biosynthesis.

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17

JAK–STAT Signaling

A direct route from selected cytokine receptors to transcriptional responses.

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18

Wnt Signaling

A family of signals with important roles in development, tissue renewal, and cell fate.

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19

TGF-β Signaling

A receptor-kinase network that regulates development, immune responses, and tissue remodeling.

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20

Apoptosis Signaling

The regulated pathways cells use to initiate and execute programmed cell death.

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21

Gs–cAMP–PKA Signaling

A common GPCR branch in which Gαs stimulates cyclic AMP production and cAMP regulates protein kinase A and other effectors.

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22

RGS Proteins

Regulators of G-protein signaling that accelerate GTP hydrolysis by selected heterotrimeric Gα subunits.

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CONNECTED RECORDS

Receptors and the RAS–MAPK Route

17 records
Protein

EGF

A growth-factor ligand produced by processing a larger precursor. EGF can bind EGFR and trigger receptor signaling.

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Protein

EGFR

EGFR is a receptor tyrosine kinase. Ligand binding can promote receptor pairing and phosphorylation, creating docking sites for adaptors that connect to RAS–RAF–MEK–ERK and PI3K–AKT signaling. Which branches dominate depends on receptor abundance, trafficking, ligand, and cell state.

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Protein

HER2 (ERBB2)

A member of the ERBB receptor family. HER2 has no established soluble ligand of its own and can participate in signaling as a partner for other ERBB receptors.

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Protein

HER3 (ERBB3)

An ERBB-family receptor with weak intrinsic kinase activity. HER3 can signal by pairing with kinase-active ERBB partners, including HER2.

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Protein

SHC1

An adaptor protein that can help assemble signaling complexes downstream of activated cell-surface receptors.

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Protein

GRB2

An adaptor protein that helps recruit SOS-family exchange factors to activated receptor signaling complexes.

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Protein

SOS1

A RAS guanine-nucleotide exchange factor. When recruited to signaling complexes, SOS1 can promote the active, GTP-bound state of RAS.

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Protein

KRAS

A molecular switch that cycles between GDP-bound and GTP-bound states. Active KRAS can recruit RAF and engage other effectors, including PI3K.

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Protein

BRAF

A RAF-family kinase that relays signals from RAS toward MEK1 and MEK2. Its activity depends on cellular context and regulatory interactions.

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Protein

RAF1 (C-RAF)

A RAF-family kinase that can relay RAS signals to MEK. RAF proteins can form dimers, so the pathway is more context-dependent than a single straight chain.

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Protein

MEK1 (MAP2K1)

A dual-specificity kinase in the MAPK cascade. MEK1 phosphorylates ERK proteins downstream of RAF-family kinases.

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Protein

MEK2 (MAP2K2)

A dual-specificity kinase in the MAPK cascade. MEK2 phosphorylates ERK proteins downstream of RAF-family kinases.

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Protein

ERK1 (MAPK3)

A MAP kinase activated by MEK1 or MEK2. ERK1 can phosphorylate many targets; its effects depend on the cell and signal context.

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Protein

ERK2 (MAPK1)

A MAP kinase activated by MEK1 or MEK2. ERK2 can phosphorylate many targets and move into the nucleus after some signals.

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Protein

Neurofibromin (NF1)

A RAS GTPase-activating protein that promotes GTP hydrolysis and can reduce RAS pathway signaling.

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Protein

DUSP6

A dual-specificity phosphatase that can remove activating phosphates from ERK and contribute to feedback regulation.

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Multi-protein complex

EGFR–HER2 Heterodimer

A representative ERBB receptor pair. Ligand-bound EGFR can pair with HER2; HER2 has no established soluble ligand of its own and can feed both MAPK and PI3K signaling through receptor-associated complexes.

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CONNECTED RECORDS

The PI3K–AKT–mTOR Route

23 records
Multi-protein complex

Class IA PI3K

A regulatory p85 subunit and catalytic p110 subunit form a lipid kinase complex. When activated, it can convert PIP2 to PIP3, helping recruit AKT and other signaling proteins to the membrane.

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Protein

p110α (PIK3CA)

The catalytic subunit of a common class IA PI3K complex. Together with a regulatory subunit, it can phosphorylate PIP2 to form PIP3.

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Protein

p85α (PIK3R1)

A regulatory subunit of class IA PI3K. Receptor-associated signals can recruit the complex and change regulation of its catalytic subunit.

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Molecule

PIP3

A membrane phospholipid signal made by PI3K from PIP2. PIP3 helps recruit AKT and other proteins to the cell membrane.

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Protein

PDK1 (PDPK1)

A kinase recruited in phosphoinositide signaling that phosphorylates AKT at threonine 308. This is distinct from pyruvate dehydrogenase kinases, which are also abbreviated PDKs.

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Protein

AKT1

A serine/threonine kinase recruited to the membrane by PIP3. AKT1 is phosphorylated by more than one kinase and regulates many targets involved in growth, survival, and metabolism.

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Protein

AKT2

An AKT kinase isoform recruited into phosphoinositide signaling. AKT2 has a prominent role in insulin-stimulated glucose transport in muscle and adipose tissue, while AKT isoform contributions overlap and depend on cellular context.

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Protein

TBC1D4 (AS160)

A Rab GTPase-activating protein that regulates GLUT4 vesicle traffic. Insulin-linked AKT phosphorylation of TBC1D4 is an important part of GLUT4 regulation in muscle and adipose cells; other signals and trafficking steps also contribute.

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Protein

GSK3β

A serine/threonine kinase that can inhibit glycogen synthase through phosphorylation. In insulin signaling, AKT-dependent inhibitory phosphorylation of GSK3B can help favor glycogen synthesis; multiple enzymes and signals regulate glycogen flux.

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Protein

FOXO1

A transcription factor whose activity and localization can be regulated by AKT-dependent phosphorylation. In hepatocytes, insulin-linked FOXO1 regulation can change expression of genes involved in glucose production; this is one part of broader liver control.

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Protein

PTEN

A lipid phosphatase that removes a phosphate from PIP3, opposing PI3K and reducing a signal that helps recruit AKT to the membrane.

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Protein

TSC1 (hamartin)

A component of the TSC1–TSC2 protein complex, which acts upstream of RHEB and helps regulate mTORC1.

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Protein

TSC2 (tuberin)

A catalytic component of the TSC1–TSC2 complex that promotes conversion of active RHEB-GTP toward RHEB-GDP, reducing mTORC1 activation.

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Multi-protein complex

TSC1–TSC2 Complex

TSC1 and TSC2 form a regulatory complex that acts as a GTPase-activating protein for RHEB. This helps restrain RHEB-driven mTORC1 activity.

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Protein

RHEB

A small GTPase that can activate mTORC1 when GTP-bound. The TSC complex regulates the balance between RHEB nucleotide states.

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Protein

mTOR (MTOR)

A protein kinase that forms distinct complexes, including mTORC1 and mTORC2. Those complexes have different subunits and functions.

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Protein

Raptor (RPTOR)

A defining mTORC1 subunit that helps recruit substrates to the complex.

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Protein

mLST8 (MLST8)

A protein subunit found in both mTORC1 and mTORC2.

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Protein

RICTOR

A defining scaffold subunit of mTORC2. The mTORC2 complex can phosphorylate AKT at serine 473.

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Multi-protein complex

mTORC1

A nutrient- and growth-responsive protein complex that coordinates cell growth with protein synthesis, nutrient use, and autophagy. It contains MTOR, RPTOR, and other subunits; it is not a single protein.

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Multi-protein complex

mTORC2

A distinct MTOR-containing complex with RICTOR and other subunits. Among its roles, mTORC2 can phosphorylate AKT at serine 473; it differs in composition and regulation from mTORC1.

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Protein

S6K1 (RPS6KB1)

A kinase that can be activated downstream of mTORC1 and phosphorylate targets involved in protein synthesis and cell growth.

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Protein

4E-BP1 (EIF4EBP1)

A translation-regulating protein. mTORC1-dependent phosphorylation can reduce 4E-BP1 binding to eIF4E, helping control translation initiation.

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CONNECTED RECORDS

GPCR and cAMP Signaling

9 records
Pathway

Gs–cAMP–PKA Signaling

A common GPCR branch in which Gαs stimulates cyclic AMP production and cAMP regulates protein kinase A and other effectors.

Open record
Protein

Gαs (GNAS)

The stimulatory alpha subunit of a heterotrimeric G protein. In its GTP-bound state, Gαs can stimulate adenylyl cyclase; GNAS has multiple gene products, so this record focuses on the Gαs signaling role.

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Protein

Adenylyl Cyclase 5 (ADCY5)

A membrane enzyme isoform that converts ATP to cyclic AMP. ADCY5 is one example of the adenylyl cyclases regulated by G-protein and other cellular inputs.

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Molecule

Cyclic AMP

A small intracellular second messenger made by adenylyl cyclases downstream of selected receptors.

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Multi-protein complex

Protein Kinase A (PKA)

A cAMP-regulated protein kinase assembled from regulatory and catalytic subunits. cAMP binding to the regulatory subunits can release active catalytic subunits; subunit composition and signaling are context-dependent.

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Protein

PKA Catalytic subunit alpha (PRKACA)

A catalytic subunit of protein kinase A. cAMP binding to regulatory subunits of the PKA holoenzyme releases active catalytic subunits; PRKACA is one catalytic isoform.

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Protein

PDE4D

A cAMP-selective phosphodiesterase isoform that hydrolyzes cyclic AMP to AMP. PDE4D splice variants and localization help shape local signal dynamics.

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Protein

RGS Proteins

Regulators of G-protein signaling that accelerate GTP hydrolysis by selected heterotrimeric Gα subunits.

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Protein

β-arrestin

Adaptor proteins that can reduce GPCR coupling to G proteins and organize receptor trafficking or other signaling events.

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